Author

Jenny Chen

Harvard Data Science Fellow - Cited by 3,884 - Computational Genomics

Biography

Dr. Jenny Chen is an Ann Arbor Department of Veterans Affairs Center for Clinical Management Research, Ann Arbor, Michigan, USA. Her research program is focused on improving the diagnostic evaluation of the sick and injured child through advanced data analytics and novel hardware design. 
Title
Cited by
Year
Perturb-Seq: dissecting molecular circuits with scalable single-cell RNA profiling of pooled genetic screens
A Dixit, O Parnas, B Li, J Chen, CP Fulco, L Jerby-Arnon, ND Marjanovic, ...cell 167 (7), 1853-1866. e17, 2016201
2016
Local regulation of gene expression by lncRNA promoters, transcription and splicing
JM Engreitz, JE Haines, EM Perez, G Munson, J Chen, M Kane, ...Nature 539 (7629), 452-455, 2016201
2016
Optimal-transport analysis of single-cell gene expression identifies developmental trajectories in reprogramming
G Schiebinger, J Shu, M Tabaka, B Cleary, V Subramanian, A Solomon, ...Cell 176 (4), 928-943. e22, 2019593201
593
2019
The NORAD lncRNA assembles a topoisomerase complex critical for genome stability
M Munschauer, CT Nguyen, K Sirokman, CR Hartigan, L Hogstrom, ...Nature 561 (7721), 132-136, 2018201
291
2018
Simultaneous generation of many RNA-seq libraries in a single reaction
AA Shishkin, G Giannoukos, A Kucukural, D Ciulla, M Busby, C Surka, ...Nature methods 12 (4), 323-325, 2015201
239
2015
Evolutionary analysis across mammals reveals distinct classes of long non-coding RNAs
J Chen, AA Shishkin, X Zhu, S Kadri, I Maza, M Guttman, JH Hanna, ...Genome biology 17 (1), 1-17, 2016201
142
2016
Microbiota modulate transcription in the intestinal epithelium without remodeling the accessible chromatin landscape
JG Camp, CL Frank, CR Lickwar, H Guturu, T Rube, AM Wenger, J Chen, ...Genome research 24 (9), 1504-1516, 2014201
120
2014
A quantitative framework for characterizing the evolutionary history of mammalian gene expression
J Chen, R Swofford, J Johnson, BB Cummings, N Rogel, K Lindblad-Toh, ...Genome research 29 (1), 53-63, 2019201
75
2019
Changes in nucleosome occupancy associated with metabolic alterations in aged mammalian liver
IM Bochkis, D Przybylski, J Chen, A RegevCell reports 9 (3), 996-1006, 2014201
69
2014
Genetic analysis of isoform usage in the human anti-viral response reveals influenza-specific regulation of ERAP2 transcripts under balancing selection
CJ Ye, J Chen, AC Villani, M Subramaniam, RE Gate, T Bhangale, ...Genome Research 28 (12), 1812-1825, 2018201
53
2018
PRISM offers a comprehensive genomic approach to transcription factor function prediction
AM Wenger, SL Clarke, H Guturu, J Chen, BT Schaar, CY McLean, ...Genome Research, 2013201
37
2013
The newcomer understanding and integration scale: Psychometric evidence across six samples
HD Cooper-Thomas, M Stadler, JH Park, J Chen, AKC Au, KWT Tan, ...Journal of Business and Psychology 35, 435-454, 2020202
21
2020
Publisher Correction: The NORAD lncRNA assembles a topoisomerase complex critical for genome stability
M Munschauer, CT Nguyen, K Sirokman, CR Hartigan, L Hogstrom, ...Nature 563 (7733), E32, 202
18
2018
Automated discovery of tissue-targeting enhancers and transcription factors from binding motif and gene function data
G Tuteja, KB Moreira, T Chung, J Chen, AM Wenger, G BejeranoPLoS Computational Biology (1), e03449, 2014201
10
2014
The effects of individual differentiation on newcomer group identification
J Chen, HD Cooper-ThomasJournal of Managerial Psychology 6 (5), 461-47, 2021202
3
2021