Author

Gerard Tromp

Professor, Computer Sciences; Director, Computational Bioscience Research Center - Cited by 7,967 - Bioinformatics - computational biology - machine learning

Biography

Head Bioinformatician, South African Tuberculosis Bioinformatics Initiative (SATBBI)DST/NRF Centre of Excellence for Biomedical Tuberculosis Research SAMRC Centre for Tuberculosis Research. Professor of Bioinformatics, Division of Molecular Biology and Human Genetics Faculty of Medicine and Health Sciences Stellenbosch University. His research centers on the application of bioinformatics and statistics to analyze large datasets and convert data to knowledge. His current research is on predictive modeling of outcomes after tuberculosis exposure and infection, using omic data from both host and pathogen.
Title
Cited by
Year
Online single-cell data integration through projecting heterogeneous datasets into a common cell-embedding space
L Xiong, K Tian, Y Li, W Ning, X Gao, QC ZhangNature communications 13 (1), 1-17, 2022202
14
2022
A comprehensive benchmarking with practical guidelines for cellular deconvolution of spatial transcriptomics
H Li, J Zhou, Z Li, S Chen, X Liao, B Zhang, R Zhang, Y Wang, S Sun, ...Nature Communications 14 (1), 1548, 2023202
9
2023
Towards improving faithfulness in abstractive summarization
X Chen, M Li, X Gao, X ZhangAdvances in Neural Information Processing Systems 35, 2516-2528, 2022202
4
2022
Vision transformer-based weakly supervised histopathological image analysis of primary brain tumors
Z Li, Y Cong, X Chen, J Qi, J Sun, T Yan, H Yang, J Liu, E Lu, L Wang, J Li, ...iScience 26 (1), 2023202
4
2023
Applications of deep learning in understanding gene regulation
Z Li, E Gao, J Zhou, W Han, X Xu, X GaoCell Reports Methods, 2023202
4
2023
Personalized and privacy-preserving federated heterogeneous medical image analysis with PPPML-HMI
J Zhou, L Zhou, D Wang, X Xu, H Li, Y Chu, W Han, X GaomedRxiv, 2023.02. 19.22279631, 2023202
4
2023
NASMDR: a framework for miRNA-drug resistance prediction using efficient neural architecture search and graph isomorphism networks
K Zheng, H Zhao, Q Zhao, B Wang, X Gao, J WangBriefings in Bioinformatics 2 (5), bbac8, 2022202
3
2022
Computational Studies of Auto-Active van der Waals Interaction Molecules on Ultra-Thin Black-Phosphorus Film
S Laref, B Wang, X Gao, T GojoboriMolecules 28 (2), 681, 20220
3
2023
SkinGPT-4: An Interactive Dermatology Diagnostic System with Visual Large Language Model
J Zhou, X He, L Sun, J Xu, X Chen, Y Chu, L Zhou, X Liao, B Zhang, ...medRxiv, 2023.06. 0.232927, 2023202
1
2023
Annotating TSSs in multiple cell types based on DNA sequence and RNA-seq data via DeeReCT-TSS
J Zhou, B Zhang, H Li, L Zhou, Z Li, Y Long, W Han, M Wang, H Cui, J Li, ...Genomics, Proteomics & Bioinformatics 20 (5), 959-973, 2022202
1
2022
Disentangled Molecular Graph Generation via an Invertible Flow Model
C Ma, Q Yang, X Gao, X ZhangProceedings of the 3st ACM International Conference on Information …, 2022202
1
2022
SD2: spatially resolved transcriptomics deconvolution through integration of dropout and spatial information
H Li, H Li, J Zhou, X GaoBioinformatics 38 (2), 4878-4884, 2022202
1
2022
Scientific Paper Extractive Summarization Enhanced by Citation Graphs
X Chen, M Li, S Gao, R Yan, X Gao, X ZhangarXiv preprint arXiv:222.0424, 2022202
1
2022
AdvCat: Domain-Agnostic Robustness Assessment for Cybersecurity-Critical Applications with Categorical Inputs
H Orsini, H Bao, Y Zhou, X Xu, Y Han, L Yi, W Wang, X Gao, X ZhangIEEE International Conference on Big Data 2022, 2022202
1
2022
scBKAP: a clustering model for single-cell RNA-seq data based on bisecting K-means
X Wang, H Gao, R Qi, R Zheng, X Gao, B YuIEEE/ACM Transactions on Computational Biology and Bioinformatics, 2022202
1
2022
New insights on the cardiovascular effects of IGF-1
New insights on the cardiovascular effects of IGF-M Mačvanin, Z Gluvić, J Radovanović, M Essack, X Gao, ER IsenovićFrontiers in Endocrinology 4, 42644, 2023202
1
2023
RPI-CapsuleGAN: Predicting RNA-protein interactions through an interpretable generative adversarial capsule network
Y Wang, X Wang, C Chen, H Gao, A Salhi, X Gao, B YuPattern Recognition 4, 09626, 2023202
1
2023
Follow the Timeline! Generating an Abstractive and Extractive Timeline Summary in Chronological Order
X Chen, M Li, S Gao, Z Chan, D Zhao, X Gao, X Zhang, R YanACM Transactions on Information Systems 4 (), -30, 2023202
1
2023
Interpretable Research Interest Shift Detection with Temporal Heterogeneous Graphs
Q Yang, C Ma, Q Zhang, X Gao, C Zhang, X ZhangProceedings of the Sixteenth ACM International Conference on Web Search and …, 2023202
1
2023
Computational network analysis of host genetic risk variants of severe COVID-19
Computational network analysis of host genetic risk variants of severe COVID-9SB Alsaedi, K Mineta, X Gao, T GojoboriHuman Genomics 7 (), 7, 2023202
1
2023

Referred From: https://scholar.google.com/citations?user=wqdK8ugAAAAJ&hl=en

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Citations 7967
h-index 48
i10-index 190
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