Author

Brian E. Scheffler

USDA ARS GBRU - Cited by 13,990 - genomics genetics

Biography

Dr. Scheffler is the director of the SEA's Genomics and Bioinformatics Research Unit which serves a majority of the genomics needs for the entire SEA and also helps with other genomics needs of the Agency.  In conjunction with ARS scientists, he and his team help in the analysis of a wide range of important species including catfish, soybean, cotton, sugarcane, rice, sweet potato and various insects.  The Laboratory specializes in DNA sequencing, DNA marker technology and subsequent bioinformatic analysis.
Title
Cited by
Year
The genome sequence of segmental allotetraploid peanut Arachis hypogaea
DJ Bertioli, J Jenkins, J Clevenger, O Dudchenko, D Gao, G Seijo, ...Nature genetics 51 (5), 877-884, 2019201
371
2019
Genomic diversifications of five Gossypium allopolyploid species and their impact on cotton improvement
ZJ Chen, A Sreedasyam, A Ando, Q Song, LM De Santiago, ...Nature genetics 52 (5), 525-533, 2020202
219
2020
Molecular insight into cotton leaf curl geminivirus disease resistance in cultivated cotton (Gossypium hirsutum)
SSA Zaidi, RZ Naqvi, M Asif, S Strickler, S Shakir, M Shafiq, AM Khan, ...Plant biotechnology journal 18 (3), 691-706, 2020202
43
2020
A high-quality genome assembly from a single, field-collected spotted lanternfly (Lycorma delicatula) using the PacBio Sequel II system
SB Kingan, J Urban, CC Lambert, P Baybayan, AK Childers, B Coates, ...GigaScience 8 (10), giz122, 2019201
40
2019
Whole genome sequencing of Asia II 1 species of whitefly reveals that genes involved in virus transmission and insecticide resistance have genetic variances between Asia II 1 …
S Hussain, M Farooq, HJ Malik, I Amin, BE Scheffler, JA Scheffler, SS Liu, ...BMC genomics 20 (1), 1-13, 2019201
37
2019
A long reads-based de-novo assembly of the genome of the Arlee homozygous line reveals chromosomal rearrangements in rainbow trout
G Gao, S Magadan, GC Waldbieser, RC Youngblood, PA Wheeler, ...G3 11 (4), jkab052, 2021202
36
2021
The USDA-ARS Ag100Pest initiative: high-quality genome assemblies for agricultural pest arthropod research
AK Childers, SM Geib, SB Sim, MF Poelchau, BS Coates, TJ Simmonds, ...Insects 12 (7), 626, 2021202
24
2021
Legacy genetics of Arachis cardenasii in the peanut crop shows the profound benefits of international seed exchange
DJ Bertioli, J Clevenger, IJ Godoy, HT Stalker, S Wood, JF Santos, ...Proceedings of the National Academy of Sciences 118 (38), e2104899118, 2021202
16
2021
Chemical defense responses of upland cotton, Gossypium hirsutum L. to physical wounding
SH Park, J Scheffler, B Scheffler, CL Cantrell, CS PauliPlant direct 3 (5), e00141, 2019201
15
2019
Two New Aspergillus flavus Reference Genomes Reveal a Large Insertion Potentially Contributing to Isolate Stress Tolerance and Aflatoxin Production
JC Fountain, JP Clevenger, B Nadon, RC Youngblood, W Korani, ...G3: Genes, Genomes, Genetics 10 (10), 3515-3531, 2020202
13
2020
Microscopic and transcriptomic analyses of dalbergoid legume peanut reveal a divergent evolution leading to nod-factor-dependent epidermal crack-entry and terminal bacteroid …
B Raul, O Bhattacharjee, A Ghosh, P Upadhyay, K Tembhare, A Singh, ...Molecular Plant-Microbe Interactions 35 (2), 131-145, 2022202
11
2022
Pyrrocidine, a molecular off switch for fumonisin biosynthesis
M Gao, AE Glenn, X Gu, TR Mitchell, T Satterlee, MV Duke, BE Scheffler, ...PLoS Pathogens 16 (7), e1008595, 2020202
11
2020
Identification of simple sequence repeat (SSR) and single nucleotide polymorphism (SNP) that are associated with the nectariless trait of Gossypium hirsutum L
SH Park, JA Scheffler, JD Ray, BE SchefflerEuphytica 217, 1-17, 2021202
6
2021
Gene disruption by structural mutations drives selection in US rice breeding over the last century
JN Vaughn, W Korani, JC Stein, JD Edwards, DG Peterson, SA Simpson, ...PLoS Genetics 17 (3), e1009389, 2021202
6
2021
Non-cultivated Cotton Species (Gossypium spp.) Act as a Reservoir for Cotton Leaf Curl Begomoviruses and Associated Satellites
S Shakir, SSA Zaidi, M Farooq, I Amin, J Scheffler, B Scheffler, ...Plants 8 (), 127, 2019201
5
2019
Tomato leaf curl Oman virus and associated Betasatellite causing leaf curl disease in tomato in Pakistan
N Ahmed, SSA Zaidi, I Amin, BE Scheffler, S MansoorEuropean Journal of Plant Pathology 160, 29-257, 2021202
4
2021
Microsatellite markers in Spanish lime (Melicoccus bijugatus Jacq., Sapindaceae), a neglected Neotropical fruit crop
J Martínez-Castillo, RS Arias, RH Andueza-Noh, MM Ortiz-García, ...Genetic Resources and Crop Evolution 66, 1371-1377, 2019201
4
2019
Analysis of a tetraploid cotton line Mac7 transcriptome reveals mechanisms underlying resistance against the whitefly Bemisia tabaci
MQ Aslam, RZ Naqvi, SSA Zaidi, M Asif, KP Akhter, BE Scheffler, ...Gene 820, 16200, 2022202
4
2022
A Chromosome-Scale Genome Assembly of a Helicoverpa zea Strain Resistant to Bacillus thuringiensis Cry1Ac Insecticidal Protein
AR Stahlke, J Chang, LR Tembrock, SB Sim, S Chudalayandi, SM Geib, ...Genome Biology and Evolution 15 (), evac11, 20220
3
2023
“Jumping Jack”: Genomic Microsatellites Underscore the Distinctiveness of Closely Related Pseudoperonospora cubensis and Pseudoperonospora humuli and …
M Nowicki, D Hadziabdic, RN Trigiano, SL Boggess, L Kanetis, PA Wadl, ...Frontiers in Microbiology 1, 686759, 010
2
2021

Referred From: https://scholar.google.com/citations?user=SnrYYc4AAAAJ&hl=en

Cited by
Citations 13990
h-index 59
i10-index 174
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